GROMACS Resources

GMX-wiki
http://wiki.gromacs.org/index.php/Main_Page

Souce code
http://www.gromacs.org/content/view/79/98/

On-line Manual
http://www.gromacs.org/component/option,com_wrapper/Itemid,192/

PRODRG
http://davapc1.bioch.dundee.ac.uk/programs/prodrg/

WHAM
http://membrane.urmc.rochester.edu/

ffAMBER
http://chemistry.csulb.edu/ffamber/
http://www.stanford.edu/group/pandegroup/folding/ffamber/index.html

Gromacs Workshop: 2007-02-26
http://tv.funet.fi/medar/showDirectory.do?directory=/metadata/fi/csc/courses/gromacs_workshop_2007

Free Energy: Tutorial - DillgroupWiki
http://www.dillgroup.ucsf.edu/group/wiki/index.php/Free_Energy:_Tutorial

Molecular Dynamics Tutorial (GROMACS)
http://md.chem.rug.nl/education/mdcourse/

QM-MM
http://www.rug.nl/gbb/research/researchgroups/molecularDynamics/index

MARTINI Forcefield: Coarse-Grained Lipid Model
http://md.chem.rug.nl/~marrink/coarsegrain.html